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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940378.1_cds_XP_016484644.1_75640
CDS Infomation

[gene=LOC107805165] [db_xref=GeneID:107805165] [protein=arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like] [protein_id=XP_016484644.1] [location=join(42028..42313,43119..43186,43286..43378,43457..43657,43874..43954,44020..44115,46195..46272,46354..46443,46522..46589,47940..48021,48597..48653)] [gbkey=CDS]
Sequence

ATGGCTTTGAAAACTGTGCCAATTTGGGCCTGTGGTACCAATCAGCAGCATTGTTGTACT
TATCCTAAATCTTTGAAATTGGGTTTTCCAGATTATGGGTCTAGGCTTTCTGGGTCAAAT
TTCTTGAATGTCAGGCCCTTTAGGAAATGGGAATGTTTGGTTTTGTTGACTGAGAGAGCT
ATCACTCCTGTGGAAGATGAGGAGCCATTAACTTCTCCTGCTGGTGCTGAAGACACACAG
ATCACTCACTCCAAAAGATTTCACAAGGATTTACAATCTTTACCAAAACCCTTATCTGCA
ACTGGTCCTTCCTGTGGTCAGGGTGATGGTTCAAAGGTGCGAGTTGCCTATCAGGGAATT
CCAGGTGCATATAGTGAGGCGGCTGCACTTAAAGCATACCCGAAATGTGAAACTGTACCA
TGTGACCAGTTTGAGGCTGCATTTAAGGCAGTTGAGTTGTGGTTAGTAGACAAAGCTGTA
CTCCCAATTGAAAACTCAGTTGGTGGGAGCATCCACCGTAACTACGATCTACTCCTTCGG
CATAGGCTGCATATTGTGGGAGAAGTGCAGTTGGTTGTTAACCACTGCCTTTTGGGGTTG
CCAGGAGTCAGGAAAGAGGAACTAAAGCGCGTCGTGAGCCACCCTCAGGCACTTGAACAA
TGCAACATTATGTTAAATAAGTTAGGTGTTACAAGGGTCAATGGTGATGATACTGCCAGT
GCTGCTCAGATTGTGGCATCTGAAGGGACGAGAGATACTGGAGCAGTTGCAAGTGCTCGA
GCTGCAGAGATTTATGGGCTCAGCATTCTTGCAGAAAGAATTCAGGATGATCAAGATAAT
ATCACTAGATTTCTGATACTAGCAAGGGAGCCCATAATTCCAGGAACTGATAGGCCATAT
AAGACTAGCATTGTCTTCACTCTGGAAGAAGGGCCTGGAGTTCTATTCAAGGCCTTAGCG
GTTTTTGCTCTGCGAGAGATCAATTTATCGAAGATTGAGAGCCGGCCTCAAAAGAAGCGC
CCGTTAAGGGTAGTAGATGACTCCAATAAAGGAAGTGCCAAGTACTTTGACTACCTCTTT
TACATTGACTTTGAAGCATCGATGGCAGAACCTCGTGCTCAATATGCTCTTGGTCATCTT
CAGGAATTTGCGAGATTCATTCGAGTTCTTGGCTGCTATCCCATGGACACAGTTCTATAA

Peptide Sequence

PEP ID

XP_016484644.1
PEP Infomation

PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MALKTVPIWACGTNQQHCCTYPKSLKLGFPDYGSRLSGSNFLNVRPFRKWECLVLLTERA
ITPVEDEEPLTSPAGAEDTQITHSKRFHKDLQSLPKPLSATGPSCGQGDGSKVRVAYQGI
PGAYSEAAALKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSIHRNYDLLLR
HRLHIVGEVQLVVNHCLLGLPGVRKEELKRVVSHPQALEQCNIMLNKLGVTRVNGDDTAS
AAQIVASEGTRDTGAVASARAAEIYGLSILAERIQDDQDNITRFLILAREPIIPGTDRPY
KTSIVFTLEEGPGVLFKALAVFALREINLSKIESRPQKKRPLRVVDDSNKGSAKYFDYLF
YIDFEASMAEPRAQYALGHLQEFARFIRVLGCYPMDTVL

Transcript Sequence

Gene sequence data has not been registered.